2016/11/06 09:51:13: DEBUG Enqueuing command:
#TASK tags=Sample_5
samtools sort -@ 6 /scratch/gencore/nov_dalma_training/resequencing/data/analysis/Sample_5/samtools/Sample_5_aligned.bam \
> /scratch/gencore/nov_dalma_training/resequencing/data/analysis/Sample_5/samtools/Sample_5_aligned.sorted.bam && \
samtools index /scratch/gencore/nov_dalma_training/resequencing/data/analysis/Sample_5/samtools/Sample_5_aligned.sorted.bam
2016/11/06 09:51:16: INFO Total execution time 0 years, 00 months, 0 days, 00 hours, 00 minutes, 03 seconds