2016/11/06 09:55:20: DEBUG Enqueuing command:
#TASK tags=Sample_5
bcftools filter -O z \
-o /scratch/gencore/nov_dalma_training/resequencing/data/analysis/Sample_5/samtools/Sample_5_filteredQ10.aligned.sorted.vcf.gz \
-s LOWQUAL -i’%QUAL>10’ \
/scratch/gencore/nov_dalma_training/resequencing/data/analysis/Sample_5/samtools/Sample_5_aligned.sorted.vcf.gz
2016/11/06 09:55:20: INFO Total execution time 0 years, 00 months, 0 days, 00 hours, 00 minutes, 00 seconds