Lab Notebook

015_gatk_realigner_target_creator CMD_015 001

DateTime: 2016-11-06T10:14:35

ProcessID: 23338

SchedulerID: 24604

2016/11/06 10:14:35: ERROR INFO 10:14:34,358 ProgressMeter - CHR_HG2288_HG2289_PATCH:81791701 7.786606808E9 22.0 m 0.0 s 18.1% 2.0 h 99.6 m
2016/11/06 10:15:04: ERROR INFO 10:15:04,379 ProgressMeter - CHR_HG2290_PATCH:148563737 7.990325538E9 22.5 m 0.0 s 18.5% 2.0 h 99.0 m
2016/11/06 10:15:34: ERROR INFO 10:15:34,397 ProgressMeter - CHR_HG2291_PATCH:94447413 8.161519783E9 23.0 m 0.0 s 19.0% 2.0 h 98.4 m
2016/11/06 10:16:04: ERROR INFO 10:16:04,412 ProgressMeter - CHR_HG986_PATCH:19802201 8.391011891E9 23.5 m 0.0 s 19.4% 2.0 h 98.0 m
2016/11/06 10:16:34: ERROR INFO 10:16:34,429 ProgressMeter - CHR_HG986_PATCH:210062001 8.391011891E9 24.0 m 0.0 s 19.8% 2.0 h 97.3 m
2016/11/06 10:17:04: ERROR INFO 10:17:04,459 ProgressMeter - CHR_HSCHR10_1_CTG2:4610201 8.773813252E9 24.5 m 0.0 s 20.2% 2.0 h 96.8 m
2016/11/06 10:17:34: ERROR INFO 10:17:34,498 ProgressMeter - CHR_HSCHR10_1_CTG3:60251601 8.907626737E9 25.0 m 0.0 s 20.7% 2.0 h 96.2 m
2016/11/06 10:18:04: ERROR INFO 10:18:04,519 ProgressMeter - CHR_HSCHR10_1_CTG4:112987701 9.041409955E9 25.5 m 0.0 s 21.1% 2.0 h 95.6 m
2016/11/06 10:18:34: ERROR INFO 10:18:34,559 ProgressMeter - CHR_HSCHR11_1_CTG1_2:23744769 9.318133297E9 26.0 m 0.0 s 21.5% 2.0 h 95.1 m
2016/11/06 10:19:04: ERROR INFO 10:19:04,628 ProgressMeter - CHR_HSCHR11_1_CTG2:73926701 9.445414877E9 26.5 m 0.0 s 21.9% 2.0 h 94.5 m
2016/11/06 10:19:34: ERROR INFO 10:19:34,634 ProgressMeter - CHR_HSCHR11_1_CTG3:123750385 9.649737259E9 27.0 m 0.0 s 22.3% 2.0 h 93.9 m
2016/11/06 10:20:04: ERROR INFO 10:20:04,660 ProgressMeter - CHR_HSCHR11_1_CTG6:40683501 9.850686005E9 27.5 m 0.0 s 22.8% 2.0 h 93.3 m
2016/11/06 10:20:34: ERROR INFO 10:20:34,698 ProgressMeter - CHR_HSCHR11_1_CTG7:96522469 9.988678305E9 28.0 m 0.0 s 23.2% 2.0 h 92.7 m
2016/11/06 10:21:04: ERROR INFO 10:21:04,712 ProgressMeter - CHR_HSCHR11_2_CTG1:5671001 1.0255952254E10 28.5 m 0.0 s 23.6% 2.0 h 92.2 m
2016/11/06 10:21:34: ERROR INFO 10:21:34,729 ProgressMeter - CHR_HSCHR11_2_CTG1_1:54736985 1.0392700482E10 29.0 m 0.0 s 24.1% 2.0 h 91.7 m
2016/11/06 10:22:04: ERROR INFO 10:22:04,747 ProgressMeter - CHR_HSCHR11_3_CTG1:107588101 1.0526129539E10 29.5 m 0.0 s 24.5% 2.0 h 91.1 m
2016/11/06 10:22:34: ERROR INFO 10:22:34,787 ProgressMeter - CHR_HSCHR12_1_CTG2:19459501 1.0794501043E10 30.0 m 0.0 s 24.9% 2.0 h 90.6 m
2016/11/06 10:23:04: ERROR INFO 10:23:04,799 ProgressMeter - CHR_HSCHR12_1_CTG2_1:69489597 1.0985847307E10 30.5 m 0.0 s 25.3% 2.0 h 90.0 m
2016/11/06 10:23:34: ERROR INFO 10:23:34,837 ProgressMeter - CHR_HSCHR12_2_CTG2:124556853 1.1072175231E10 31.0 m 0.0 s 25.8% 2.0 h 89.5 m
2016/11/06 10:24:04: ERROR INFO 10:24:04,883 ProgressMeter - CHR_HSCHR12_3_CTG2:41022629 1.1338994222E10 31.5 m 0.0 s 26.2% 2.0 h 88.9 m
2016/11/06 10:24:34: ERROR INFO 10:24:34,910 ProgressMeter - CHR_HSCHR12_3_CTG2_1:94876901 1.146092806E10 32.0 m 0.0 s 26.6% 2.0 h 88.3 m
2016/11/06 10:25:04: ERROR INFO 10:25:04,961 ProgressMeter - CHR_HSCHR12_4_CTG2_1:7140901 1.1727487128E10 32.5 m 0.0 s 27.0% 2.0 h 87.9 m
2016/11/06 10:25:34: ERROR INFO 10:25:34,998 ProgressMeter - CHR_HSCHR12_5_CTG2:49539901 1.1860768479E10 33.0 m 0.0 s 27.4% 2.0 h 87.4 m
2016/11/06 10:26:05: ERROR INFO 10:26:05,017 ProgressMeter - CHR_HSCHR12_5_CTG2_1:96671401 1.1994043716E10 33.5 m 0.0 s 27.8% 2.0 h 86.9 m
2016/11/06 10:26:35: ERROR INFO 10:26:35,051 ProgressMeter - CHR_HSCHR12_7_CTG2_1:5423701 1.2260598555E10 34.0 m 0.0 s 28.2% 2.0 h 86.5 m
2016/11/06 10:27:05: ERROR INFO 10:27:05,073 ProgressMeter - CHR_HSCHR13_1_CTG1:61145101 1.2393888033E10 34.5 m 0.0 s 28.7% 2.0 h 85.9 m
2016/11/06 10:27:35: ERROR INFO 10:27:35,097 ProgressMeter - CHR_HSCHR13_1_CTG3:15687401 1.262260452E10 35.0 m 0.0 s 29.1% 2.0 h 85.3 m
2016/11/06 10:28:05: ERROR INFO 10:28:05,119 ProgressMeter - CHR_HSCHR13_1_CTG4:90068401 1.2736974746E10 35.5 m 0.0 s 29.5% 2.0 h 84.8 m
2016/11/06 10:28:35: ERROR INFO 10:28:35,156 ProgressMeter - CHR_HSCHR13_1_CTG6:45120301 1.2965708428E10 36.0 m 0.0 s 30.0% 2.0 h 84.2 m
2016/11/06 10:29:05: ERROR INFO 10:29:05,198 ProgressMeter - CHR_HSCHR14_2_CTG1:8542701 1.3187122974E10 36.6 m 0.0 s 30.4% 2.0 h 83.7 m
2016/11/06 10:29:35: ERROR INFO 10:29:35,209 ProgressMeter - CHR_HSCHR14_3_CTG1:82644901 1.3294173836E10 37.1 m 0.0 s 30.8% 2.0 h 83.2 m
2016/11/06 10:30:05: ERROR INFO 10:30:05,248 ProgressMeter - CHR_HSCHR15_1_CTG1:35877593 1.352979965E10 37.6 m 0.0 s 31.2% 2.0 h 82.8 m
2016/11/06 10:30:35: ERROR INFO 10:30:35,278 ProgressMeter - CHR_HSCHR15_1_CTG8:9196601 1.371228039E10 38.1 m 0.0 s 31.6% 2.0 h 82.4 m
2016/11/06 10:31:05: ERROR INFO 10:31:05,318 ProgressMeter - CHR_HSCHR15_2_CTG3:95593301 1.3814283199E10 38.6 m 0.0 s 32.0% 2.0 h 81.8 m

2016/11/06 10:32:05: ERROR INFO 10:32:05,387 ProgressMeter - CHR_HSCHR15_4_CTG8:38881553 1.4255093122E10 39.6 m 0.0 s 32.8% 2.0 h 80.9 m
2016/11/06 10:32:35: ERROR INFO 10:32:35,400 ProgressMeter - CHR_HSCHR15_6_CTG8:16827201 1.4426417635E10 40.1 m 0.0 s 33.3% 2.0 h 80.4 m
2016/11/06 10:33:05: ERROR INFO 10:33:05,424 ProgressMeter - CHR_HSCHR16_1_CTG3_1:10790901 1.4618366013E10 40.6 m 0.0 s 33.7% 2.0 h 79.8 m
2016/11/06 10:33:35: ERROR INFO 10:33:35,467 ProgressMeter - CHR_HSCHR16_3_CTG1:17769601 1.4799044729E10 41.1 m 0.0 s 34.1% 2.0 h 79.3 m
2016/11/06 10:34:05: ERROR INFO 10:34:05,507 ProgressMeter - CHR_HSCHR16_4_CTG1:26589501 1.4979731203E10 41.6 m 0.0 s 34.6% 2.0 h 78.7 m
2016/11/06 10:34:35: ERROR INFO 10:34:35,527 ProgressMeter - CHR_HSCHR17_10_CTG4:25975301 1.5160413439E10 42.1 m 0.0 s 35.0% 2.0 h 78.2 m
2016/11/06 10:35:05: ERROR INFO 10:35:05,559 ProgressMeter - CHR_HSCHR17_1_CTG2:35918601 1.5327063021E10 42.6 m 0.0 s 35.4% 2.0 h 77.7 m
2016/11/06 10:35:35: ERROR INFO 10:35:35,598 ProgressMeter - CHR_HSCHR17_1_CTG5:59592901 1.5493584149E10 43.1 m 0.0 s 35.8% 2.0 h 77.2 m
2016/11/06 10:36:05: ERROR INFO 10:36:05,609 ProgressMeter - CHR_HSCHR17_2_CTG1:82421501 1.5660392318E10 43.6 m 0.0 s 36.3% 2.0 h 76.6 m
2016/11/06 10:36:35: ERROR INFO 10:36:35,661 ProgressMeter - CHR_HSCHR17_2_CTG5:21470301 1.5910075528E10 44.1 m 0.0 s 36.7% 2.0 h 76.0 m
2016/11/06 10:37:05: ERROR INFO 10:37:05,679 ProgressMeter - CHR_HSCHR17_3_CTG4:43603601 1.6076420094E10 44.6 m 0.0 s 37.1% 2.0 h 75.5 m
2016/11/06 10:37:35: ERROR INFO 10:37:35,688 ProgressMeter - CHR_HSCHR17_5_CTG4:71034801 1.6242947053E10 45.1 m 0.0 s 37.6% 119.9 m 74.9 m
2016/11/06 10:38:05: ERROR INFO 10:38:05,740 ProgressMeter - CHR_HSCHR17_8_CTG4:10331301 1.6492498471E10 45.6 m 0.0 s 38.0% 119.9 m 74.3 m
2016/11/06 10:38:35: ERROR INFO 10:38:35,772 ProgressMeter - CHR_HSCHR18_1_CTG1_1:24149401 1.6659020736E10 46.1 m 0.0 s 38.4% 119.9 m 73.8 m
2016/11/06 10:39:05: ERROR INFO 10:39:05,808 ProgressMeter - CHR_HSCHR18_1_CTG2_1:53270901 1.681978743E10 46.6 m 0.0 s 38.9% 119.8 m 73.3 m
2016/11/06 10:39:35: ERROR INFO 10:39:35,829 ProgressMeter - CHR_HSCHR18_2_CTG2_1:1644601 1.7060992202E10 47.1 m 0.0 s 39.3% 119.7 m 72.7 m
2016/11/06 10:40:05: ERROR INFO 10:40:05,867 ProgressMeter - CHR_HSCHR18_4_CTG1_1:30954801 1.7221749961E10 47.6 m 0.0 s 39.7% 119.7 m 72.1 m
2016/11/06 10:40:35: ERROR INFO 10:40:35,908 ProgressMeter - CHR_HSCHR18_ALT2_CTG2_1:61436901 1.738250471E10 48.1 m 0.0 s 40.2% 119.6 m 71.6 m
2016/11/06 10:41:05: ERROR INFO 10:41:05,938 ProgressMeter - CHR_HSCHR19KIR_ABC08_AB_HAP_T_P_CTG3_1:56877401 1.7580117226E10 48.6 m 0.0 s 40.6% 119.5 m 71.0 m
2016/11/06 10:41:35: ERROR INFO 10:41:35,948 ProgressMeter - CHR_HSCHR19KIR_FH06_BA1_HAP_CTG3_1:11472301 1.781465826E10 49.1 m 0.0 s 41.0% 119.5 m 70.4 m
2016/11/06 10:42:05: ERROR INFO 10:42:05,978 ProgressMeter - CHR_HSCHR19KIR_FH13_A_HAP_CTG3_1:23668901 1.7990527621E10 49.6 m 0.0 s 41.5% 119.5 m 69.9 m
2016/11/06 10:42:36: ERROR INFO 10:42:36,017 ProgressMeter - CHR_HSCHR19KIR_FH15_B_HAP_CTG3_1:38376501 1.8166424149E10 50.1 m 0.0 s 41.9% 119.4 m 69.3 m
2016/11/06 10:43:06: ERROR INFO 10:43:06,038 ProgressMeter - CHR_HSCHR19KIR_G248_A_HAP_CTG3_1:48476901 1.8342334834E10 50.6 m 0.0 s 42.3% 119.4 m 68.8 m
2016/11/06 10:43:36: ERROR INFO 10:43:36,067 ProgressMeter - CHR_HSCHR19KIR_LUCE_A_HAP_CTG3_1:6633701 1.857686076E10 51.1 m 0.0 s 42.8% 119.3 m 68.2 m