2016/11/06 11:53:55: INFO Starting Job: 17
Cmd is #TASK tags=Sample_5
mkdir -p /scratch/gencore/nov_dalma_training/resequencing/data/analysis/Sample_5/freebayes && \
freebayes -f /scratch/Reference_Genomes/Public/Vertebrate_mammalian/Homo_sapiens/ENSEMBL-release-81-GRCh38/Homo_sapiens.GRCh38.dna.toplevel.fa \
/scratch/gencore/nov_dalma_training/resequencing/data/analysis/Sample_5/gatk/Sample_5_realigned.withrg.csorted.cleaned.aligned.bam \
/scratch/gencore/nov_dalma_training/resequencing/data/analysis/Sample_5/freebayes/Sample_5_freebayes_raw.vcf
2016/11/06 12:10:04: INFO Finishing job 17 with ExitCode 0
2016/11/06 12:10:04: INFO Total execution time 0 years, 00 months, 0 days, 00 hours, 16 minutes, 10 seconds